Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccsX | dtxR | jk1893 | jk1097 | Thiol-disulfide isomerase/thioredoxin. | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | 0.570 |
| ccsX | hemL | jk1893 | jk1895 | Thiol-disulfide isomerase/thioredoxin. | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | 0.992 |
| ccsX | hmuO | jk1893 | jk0320 | Thiol-disulfide isomerase/thioredoxin. | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | 0.720 |
| ccsX | mco | jk1893 | jk1434 | Thiol-disulfide isomerase/thioredoxin. | Multicopper oxidase. | 0.472 |
| ctaB | hemH | jk0991 | jk1996 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.921 |
| ctaB | hmuO | jk0991 | jk0320 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | 0.900 |
| dtxR | ccsX | jk1097 | jk1893 | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | Thiol-disulfide isomerase/thioredoxin. | 0.570 |
| dtxR | hemL | jk1097 | jk1895 | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | 0.897 |
| dtxR | hmuO | jk1097 | jk0320 | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | 0.831 |
| dtxR | hmuT | jk1097 | jk0316 | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | Putative iron ABC transport system, solute-binding protein. | 0.564 |
| dtxR | htaA | jk1097 | jk0315 | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | Putative membrane protein. | 0.515 |
| hemH | ctaB | jk1996 | jk0991 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.921 |
| hemH | hemL | jk1996 | jk1895 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | 0.420 |
| hemH | hmuO | jk1996 | jk0320 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | 0.932 |
| hemH | mco | jk1996 | jk1434 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Multicopper oxidase. | 0.918 |
| hemL | ccsX | jk1895 | jk1893 | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | Thiol-disulfide isomerase/thioredoxin. | 0.992 |
| hemL | dtxR | jk1895 | jk1097 | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | Iron-dependent repressor DtxR; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). | 0.897 |
| hemL | hemH | jk1895 | jk1996 | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.420 |
| hemL | hmuO | jk1895 | jk0320 | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | 0.716 |
| hmuO | ccsX | jk0320 | jk1893 | HmuO protein; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. | Thiol-disulfide isomerase/thioredoxin. | 0.720 |
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