Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cysE | cysY | jk0393 | jk1981 | Serine acetyltransferase (EC 2.3.1.30) (SAT). | Cystathionine beta-synthase. | 0.961 |
cysE | hom | jk0393 | jk1352 | Serine acetyltransferase (EC 2.3.1.30) (SAT). | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | 0.810 |
cysE | metB | jk0393 | jk0055 | Serine acetyltransferase (EC 2.3.1.30) (SAT). | Cystathionine gamma-synthase (EC 2.5.1.48) (CGS) (O-succinylhomoserine (Thiol)-lyase). | 0.503 |
cysE | sdaA | jk0393 | jk1506 | Serine acetyltransferase (EC 2.3.1.30) (SAT). | L-serine dehydratase. | 0.908 |
cysE | thrB | jk0393 | jk1350 | Serine acetyltransferase (EC 2.3.1.30) (SAT). | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.821 |
cysY | cysE | jk1981 | jk0393 | Cystathionine beta-synthase. | Serine acetyltransferase (EC 2.3.1.30) (SAT). | 0.961 |
cysY | hom | jk1981 | jk1352 | Cystathionine beta-synthase. | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | 0.817 |
cysY | metB | jk1981 | jk0055 | Cystathionine beta-synthase. | Cystathionine gamma-synthase (EC 2.5.1.48) (CGS) (O-succinylhomoserine (Thiol)-lyase). | 0.983 |
cysY | metE | jk1981 | jk0234 | Cystathionine beta-synthase. | Methionine synthase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.903 |
cysY | metY | jk1981 | jk1694 | Cystathionine beta-synthase. | O-acetylhomoserine (thiol)-lyase; Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase). | 0.911 |
cysY | sdaA | jk1981 | jk1506 | Cystathionine beta-synthase. | L-serine dehydratase. | 0.905 |
cysY | thrB | jk1981 | jk1350 | Cystathionine beta-synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.812 |
hom | cysE | jk1352 | jk0393 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Serine acetyltransferase (EC 2.3.1.30) (SAT). | 0.810 |
hom | cysY | jk1352 | jk1981 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Cystathionine beta-synthase. | 0.817 |
hom | ilvE | jk1352 | jk0710 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Branched-chain amino acid aminotransferase. | 0.865 |
hom | metB | jk1352 | jk0055 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Cystathionine gamma-synthase (EC 2.5.1.48) (CGS) (O-succinylhomoserine (Thiol)-lyase). | 0.930 |
hom | metE | jk1352 | jk0234 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Methionine synthase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.847 |
hom | metY | jk1352 | jk1694 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | O-acetylhomoserine (thiol)-lyase; Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase). | 0.849 |
hom | sdaA | jk1352 | jk1506 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | L-serine dehydratase. | 0.820 |
hom | thrB | jk1352 | jk1350 | Homoserine dehydrogenase (EC 1.1.1.3) (HDH). | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
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