Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8TKK4_VOLCA | D8TP10_VOLCA | D8TKK4 | D8TP10 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.408 |
D8TKK4_VOLCA | D8TSQ5_VOLCA | D8TKK4 | D8TSQ5 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.764 |
D8TKK4_VOLCA | D8UC14_VOLCA | D8TKK4 | D8UC14 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.504 |
D8TKK4_VOLCA | hstH2B-11 | D8TKK4 | D8TP19 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.408 |
D8TKK4_VOLCA | hstH2B-12 | D8TKK4 | D8TQ57 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.408 |
D8TKK4_VOLCA | hstH2B-13 | D8TKK4 | D8UMG1 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.408 |
D8TKK4_VOLCA | hstH4-13 | D8TKK4 | D8TP21 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
D8TKK4_VOLCA | hstH4-8 | D8TKK4 | D8THQ3 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
D8TKK4_VOLCA | rpl40 | D8TKK4 | D8U547 | Uncharacterized protein. | Component of cytosolic 80S ribosome and 60S large subunit. | 0.978 |
D8TKK4_VOLCA | rps27A | D8TKK4 | D8TIC0 | Uncharacterized protein. | Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit. | 0.981 |
D8TP10_VOLCA | D8TKK4_VOLCA | D8TP10 | D8TKK4 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.408 |
D8TP10_VOLCA | D8TSQ5_VOLCA | D8TP10 | D8TSQ5 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.674 |
D8TP10_VOLCA | D8UC14_VOLCA | D8TP10 | D8UC14 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.675 |
D8TP10_VOLCA | hstH4-13 | D8TP10 | D8TP21 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.658 |
D8TP10_VOLCA | hstH4-8 | D8TP10 | D8THQ3 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.715 |
D8TP10_VOLCA | rpl40 | D8TP10 | D8U547 | Histone H2B; Belongs to the histone H2B family. | Component of cytosolic 80S ribosome and 60S large subunit. | 0.538 |
D8TP10_VOLCA | rps27A | D8TP10 | D8TIC0 | Histone H2B; Belongs to the histone H2B family. | Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit. | 0.543 |
D8TSQ5_VOLCA | D8TKK4_VOLCA | D8TSQ5 | D8TKK4 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.764 |
D8TSQ5_VOLCA | D8TP10_VOLCA | D8TSQ5 | D8TP10 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.674 |
D8TSQ5_VOLCA | D8UC14_VOLCA | D8TSQ5 | D8UC14 | Histone H2A; Belongs to the histone H2A family. | Histone H2A; Belongs to the histone H2A family. | 0.703 |
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