STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8U6D5_VOLCAUncharacterized protein. (542 aa)    
Predicted Functional Partners:
mrpS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.927
D8UEU6_VOLCA
Uncharacterized protein.
   
 
 0.897
mrpL33
Mitochondrial ribosomal protein L33.
   
 
 0.895
prpS16
Plastid/chloroplast ribosomal protein S16.
  
 
 0.885
D8TIP9_VOLCA
L51_S25_CI-B8 domain-containing protein.
   
 
 0.863
D8TKK3_VOLCA
Uncharacterized protein.
   
 
 0.857
AGO2
Argonaute-like protein.
   
 0.844
D8U062_VOLCA
Uncharacterized protein.
   
 0.844
AGO3
Argonaute-like protein.
   
 0.844
D8TQR8_VOLCA
Uncharacterized protein.
   
 
 0.831
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.