STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72; Processively dephosphorylates Ser-5 of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1); Belongs to the SSU72 phosphatase family. (257 aa)    
Predicted Functional Partners:
CHGG_08173
Uncharacterized protein.
   
 0.997
CHGG_05754
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.997
CHGG_05580
WD_REPEATS_REGION domain-containing protein.
   
 0.997
CHGG_09687
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.996
CHGG_01713
CPSF_A domain-containing protein.
    
 0.996
CHGG_05127
Fip1 domain-containing protein.
    
 0.995
CHGG_05742
WD_REPEATS_REGION domain-containing protein.
    
 0.995
CHGG_07192
Uncharacterized protein.
    
 0.994
CHGG_01795
DUF3453 domain-containing protein.
   
 
 0.993
CHGG_02726
YTH domain-containing protein.
    
 0.986
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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