STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGG_09057Methionine aminopeptidase 2-1; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (439 aa)    
Predicted Functional Partners:
CHGG_05531
60S ribosomal protein L7.
  
 
 0.895
CHGG_02807
60S ribosomal protein L35.
  
 
 0.880
CHGG_07020
60S ribosomal protein L5.
  
 
 0.875
CHGG_08253
KOW domain-containing protein.
  
   0.867
CHGG_05830
60S ribosomal protein L25.
  
 
 0.853
CHGG_03149
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.824
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.803
CHGG_05855
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.793
CHGG_05532
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
   0.784
CHGG_09787
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.783
Your Current Organism:
Chaetomium globosum
NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51
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