STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUG_05128Malate dehydrogenase. (343 aa)    
Predicted Functional Partners:
CLUG_03965
Citrate synthase; Belongs to the citrate synthase family.
  
 0.985
CLUG_00422
Aminotran_1_2 domain-containing protein.
   
 0.974
CLUG_03520
Uncharacterized protein.
  
 0.974
CLUG_02542
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.961
CLUG_01486
Aspartate aminotransferase.
   
 0.956
CLUG_04333
Aminotran_1_2 domain-containing protein.
   
 0.956
CLUG_05483
Uncharacterized protein.
  
 0.954
CLUG_01275
Malate synthase.
   
 0.944
CLUG_02817
Malate synthase; Belongs to the malate synthase family.
   
 0.944
CLUG_03985
Phosphoenolpyruvate carboxykinase.
   
 
 0.928
Your Current Organism:
Clavispora lusitaniae
NCBI taxonomy Id: 306902
Other names: C. lusitaniae ATCC 42720, Candida lusitaniae ATCC 42720, Clavispora lusitaniae ATCC 42720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.