STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_8228Coiled-coil domain-containing 112. (472 aa)    
Predicted Functional Partners:
C2E21_2338
Pre-mRNA-splicing factor CWC22-like protein isoform X1.
   
 0.889
C2E21_0145
Ribosomal--alanine acetyltransferase.
   
 0.889
C2E21_6460
Ankyrin repeat domain.
   
 0.645
C2E21_1524
WD repeat-containing 90.
   
 0.633
C2E21_6927
REJ domain.
   
 0.603
C2E21_2263
Histone H2A deubiquitinase MYSM1 isoform A.
    
 0.558
C2E21_3058
E3 ubiquitin-ligase PRT1.
    
 0.444
C2E21_9207
Epsilon tubulin; Belongs to the tubulin family.
  
 
  0.429
C2E21_7529
P53-induced death domain-containing 1 isoform X1.
   
  0.419
C2E21_5987
Ankyrin-1 isoform X2.
   
  0.416
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.