STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_7343Cysteinyl-tRNA synthetase isoform B. (852 aa)    
Predicted Functional Partners:
C2E21_1849
Cysteine--tRNA cytoplasmic isoform X1.
  
  
 
0.935
C2E21_4415
Ribonuclease III.
  
  
 0.872
C2E21_3277
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform A.
  
 
 0.810
C2E21_8760
Leucine--tRNA cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.759
C2E21_8506
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.748
C2E21_5577
Uncharacterized protein.
  
    0.735
C2E21_8504
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.729
C2E21_2873
Leucine--tRNA mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.681
C2E21_4908
Glycyl-tRNA synthetase.
  
 
 0.663
C2E21_6204
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.652
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.