STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6504CWF19 2. (1489 aa)    
Predicted Functional Partners:
C2E21_6104
Pre-mRNA-processing factor 17-like isoform X1.
   
 0.979
C2E21_0237
Pre-mRNA-processing-splicing factor 8 isoform B.
    
 
 0.945
C2E21_9058
Spliceosome nuclear pre-mRNA splicing factor.
    
   0.930
C2E21_0907
Cell division cycle 5 isoform A.
    
   0.930
C2E21_1265
116 kDa U5 small nuclear ribonucleo component-like isoform B.
    
 
 0.930
C2E21_9551
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.927
C2E21_8774
Pleiotropic regulatory locus 1.
   
   0.912
C2E21_3880
Pre-mRNA-splicing factor SYF1.
    
 
 0.856
C2E21_1643
SNW SKI-interacting-like.
   
   0.851
C2E21_3847
U2 small nuclear ribonucleo A.
    
 
 0.847
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.