STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0383NifU chloroplastic isoform B. (472 aa)    
Predicted Functional Partners:
C2E21_0588
Cysteine desulfurase.
  
 0.839
C2E21_6319
Cysteine desulfurase.
  
 0.737
C2E21_5476
Class V aminotransferase.
  
 0.737
C2E21_3776
Cysteine desulfurase.
  
 0.737
C2E21_2371
L-cysteine desulfhydrase 1 isoform X2.
  
 0.737
C2E21_2091
Aminotransferase class V.
  
 0.737
C2E21_1787
Cysteine desulfurase.
  
 0.737
C2E21_0494
Dihydroxy-acid dehydratase.
  
 
 0.686
C2E21_4616
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.650
C2E21_0269
Iron-sulfur cluster biosynthesis family.
  
 
 0.635
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.