STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_0603Peptide chain release factor 1; Belongs to the cyclin family. (1118 aa)    
Predicted Functional Partners:
C2E21_9430
HemK methyltransferase family member 2.
  
 
 0.788
C2E21_2889
HemK methyltransferase family member 1.
  
 
 0.788
C2E21_8771
40S ribosomal S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.770
C2E21_1960
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.768
C2E21_8263
50S ribosomal L27.
  
 
 0.761
C2E21_6174
40S ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.738
C2E21_5371
Mitochondrial ribosomal S6.
  
 
 0.725
C2E21_5844
40S ribosomal S14-2; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.718
C2E21_5398
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.717
C2E21_7369
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.716
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.