STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN1Fibronectin 1. (2271 aa)    
Predicted Functional Partners:
FGB
Fibrinogen beta chain.
   
 0.944
THBS1
Thrombospondin 1.
   
 0.941
FGA
Fibrinogen alpha chain.
    
 0.937
FGG
Fibrinogen gamma chain.
    
  0.934
SERPINF2
Serpin family F member 2.
    
  0.922
SDC4
Syndecan 4.
     
 0.895
LOC112977265
CD44 antigen-like.
     
 0.889
ITGB3
Integrin subunit beta 3.
   
 
 0.867
ITGB6
Integrin subunit beta 6.
   
 
 0.864
ITGA9
Integrin subunit alpha 9.
     
 0.852
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.