STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383V1Q5Uncharacterized protein. (541 aa)    
Predicted Functional Partners:
A0A383VLB9
Uncharacterized protein.
    
 0.749
A0A383WIM0
Uncharacterized protein.
    
 0.725
A0A383VA88
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.709
A0A383VG73
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.679
A0A383VRG6
Uncharacterized protein.
   
   0.679
A0A383VK10
Uncharacterized protein.
   
   0.677
A0A383VXM0
Uncharacterized protein.
   
 
 0.652
A0A383WPY1
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.645
A0A383V6Z7
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.631
A0A383VJJ8
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.629
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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