STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383VW84Malate dehydrogenase. (337 aa)    
Predicted Functional Partners:
A0A383WIV2
Citrate synthase; Belongs to the citrate synthase family.
  
 0.984
A0A383VJN8
Citrate synthase; Belongs to the citrate synthase family.
  
 0.978
A0A383VTW9
Citrate synthase.
  
 0.978
A0A383W700
Uncharacterized protein.
  
 0.976
A0A383VNE4
Aspartate aminotransferase.
   
 0.975
A0A383VJY3
Uncharacterized protein.
  
 0.973
A0A383VUY5
Uncharacterized protein.
  
 0.973
A0A383V9K1
Aspartate aminotransferase.
   
 0.971
A0A383VJI1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.968
A0A383VUD8
Uncharacterized protein.
   
 0.967
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.