STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383W3X8CbiX domain-containing protein. (125 aa)    
Predicted Functional Partners:
A0A383VPJ8
TP_methylase domain-containing protein.
  
 
 0.906
A0A383WH50
TP_methylase domain-containing protein.
  
 
 0.906
A0A383VQM5
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
  
 
 0.785
A0A383V398
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.758
A0A383WBA9
Uncharacterized protein.
     
 0.758
A0A383WMC5
Thioredoxin domain-containing protein.
  
  
 0.701
A0A383V4C4
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.594
A0A383VF44
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.594
A0A383VIK5
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.594
A0A383VKG6
Uncharacterized protein.
    
 0.594
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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