STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A383WFG6Uncharacterized protein. (316 aa)    
Predicted Functional Partners:
A0A383VAM9
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
 
 0.993
A0A383WLL5
Uncharacterized protein.
     
 0.965
A0A383V410
DFP domain-containing protein.
  
 
 0.949
A0A383WLB4
Uncharacterized protein.
  
 
 0.944
A0A383VWK4
CN hydrolase domain-containing protein.
     
 0.932
A0A383VLJ6
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.892
A0A383VZT6
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.892
A0A383VG57
Cytidylate_kin domain-containing protein.
   
  0.866
A0A383W5Y2
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
     
 0.866
A0A383WPQ0
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
     
 0.866
Your Current Organism:
Tetradesmus obliquus
NCBI taxonomy Id: 3088
Other names: Achnanthes obliqua, Acutodesmus obliquus, Acutodesmus obliquus (Turpin) Hegewald & Hanagata, 2000, Scenedesmus obliquus, T. obliquus, Tetradesmus obliquus (Turpin) M.J.Wynne, 2016
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