Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACI18746.1 | ACI19062.1 | DICTH_0268 | DICTH_0269 | Hypothetical protein; Identified by glimmer; putative. | Parallel beta-helix repeat. | 0.697 |
ACI18746.1 | ACI20100.1 | DICTH_0268 | DICTH_0267 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.508 |
ACI19062.1 | ACI18746.1 | DICTH_0269 | DICTH_0268 | Parallel beta-helix repeat. | Hypothetical protein; Identified by glimmer; putative. | 0.697 |
ACI19062.1 | ACI19167.1 | DICTH_0269 | DICTH_1344 | Parallel beta-helix repeat. | Glycosyltransferase. | 0.562 |
ACI19062.1 | ACI19295.1 | DICTH_0269 | DICTH_1023 | Parallel beta-helix repeat. | DNA translocase FtsK; Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | 0.605 |
ACI19062.1 | ACI19314.1 | DICTH_0269 | DICTH_0974 | Parallel beta-helix repeat. | Carboxyl-terminal protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | 0.438 |
ACI19062.1 | ACI20100.1 | DICTH_0269 | DICTH_0267 | Parallel beta-helix repeat. | Hypothetical protein; Identified by glimmer; putative. | 0.464 |
ACI19062.1 | acpP | DICTH_0269 | DICTH_0795 | Parallel beta-helix repeat. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.514 |
ACI19167.1 | ACI19062.1 | DICTH_1344 | DICTH_0269 | Glycosyltransferase. | Parallel beta-helix repeat. | 0.562 |
ACI19295.1 | ACI19062.1 | DICTH_1023 | DICTH_0269 | DNA translocase FtsK; Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. | Parallel beta-helix repeat. | 0.605 |
ACI19314.1 | ACI19062.1 | DICTH_0974 | DICTH_0269 | Carboxyl-terminal protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family. | Parallel beta-helix repeat. | 0.438 |
ACI20100.1 | ACI18746.1 | DICTH_0267 | DICTH_0268 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.508 |
ACI20100.1 | ACI19062.1 | DICTH_0267 | DICTH_0269 | Hypothetical protein; Identified by glimmer; putative. | Parallel beta-helix repeat. | 0.464 |
acpP | ACI19062.1 | DICTH_0795 | DICTH_0269 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Parallel beta-helix repeat. | 0.514 |