node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACI18302.1 | ACI18917.1 | DICTH_1499 | DICTH_1505 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | 0.797 |
ACI18302.1 | ACI19376.1 | DICTH_1499 | DICTH_1498 | Conserved hypothetical protein. | Cytoplasmic membrane protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669. | 0.797 |
ACI18302.1 | ACI19677.1 | DICTH_1499 | DICTH_1492 | Conserved hypothetical protein. | single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM TIGR00644. | 0.689 |
ACI18302.1 | queA | DICTH_1499 | DICTH_1497 | Conserved hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.869 |
ACI18302.1 | queH | DICTH_1499 | DICTH_1501 | Conserved hypothetical protein. | Uncharacterized conserved protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | 0.797 |
ACI18302.1 | ruvA | DICTH_1499 | DICTH_1503 | Conserved hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.832 |
ACI18302.1 | ruvB | DICTH_1499 | DICTH_1502 | Conserved hypothetical protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.921 |
ACI18302.1 | ruvC | DICTH_1499 | DICTH_1504 | Conserved hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.797 |
ACI18302.1 | tgt | DICTH_1499 | DICTH_1496 | Conserved hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.820 |
ACI18302.1 | yajC | DICTH_1499 | DICTH_1495 | Conserved hypothetical protein. | Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739. | 0.797 |
ACI18917.1 | ACI18302.1 | DICTH_1505 | DICTH_1499 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Conserved hypothetical protein. | 0.797 |
ACI18917.1 | ACI19376.1 | DICTH_1505 | DICTH_1498 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Cytoplasmic membrane protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669. | 0.797 |
ACI18917.1 | ACI19677.1 | DICTH_1505 | DICTH_1492 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM TIGR00644. | 0.699 |
ACI18917.1 | queA | DICTH_1505 | DICTH_1497 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.797 |
ACI18917.1 | queH | DICTH_1505 | DICTH_1501 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Uncharacterized conserved protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | 0.797 |
ACI18917.1 | ruvA | DICTH_1505 | DICTH_1503 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.811 |
ACI18917.1 | ruvB | DICTH_1505 | DICTH_1502 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.850 |
ACI18917.1 | ruvC | DICTH_1505 | DICTH_1504 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.828 |
ACI18917.1 | tgt | DICTH_1505 | DICTH_1496 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.801 |
ACI18917.1 | yajC | DICTH_1505 | DICTH_1495 | Conserved hypothetical protein; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739. | 0.807 |