STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HVO_1272TrmB family transcription regulator. (362 aa)    
Predicted Functional Partners:
HVO_2073
TrmB family transcription regulator.
  
   
 0.686
HVO_0566
Glycoside transferase domain protein.
  
     0.618
orc5
Orc1-type DNA replication protein; Involved in regulation of DNA replication.
  
     0.611
HVO_0341
DUF87 domain protein.
  
     0.577
guaB1
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.484
HVO_1271
Receiver box response regulator.
       0.474
HVO_0816
Putative phosphoesterase.
  
     0.472
HVO_1301
DUF87 domain protein.
  
     0.461
HVO_0759
Major facilitator superfamily transport protein.
  
     0.459
HVO_1464
ABC-type transport system periplasmic substrate-binding protein.
  
     0.450
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.