node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ispH | trd_1159 | trd_1164 | trd_1159 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Phytoene synthetase; Identified by match to protein family HMM PF00494. | 0.814 |
ispH | trd_1160 | trd_1164 | trd_1160 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Conserved hypothetical protein. | 0.773 |
ispH | trd_1161 | trd_1164 | trd_1161 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.773 |
ispH | trd_1162 | trd_1164 | trd_1162 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240. | 0.787 |
ispH | trd_1163 | trd_1164 | trd_1163 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.782 |
ispH | trd_1165 | trd_1164 | trd_1165 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Glycolate oxidase subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913. | 0.565 |
trd_0005 | trd_1144 | trd_0005 | trd_1144 | Tetratricopeptide repeat family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Conserved hypothetical protein. | 0.490 |
trd_0005 | trd_1162 | trd_0005 | trd_1162 | Tetratricopeptide repeat family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240. | 0.592 |
trd_0866 | trd_0868 | trd_0866 | trd_0868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.957 |
trd_0866 | trd_1144 | trd_0866 | trd_1144 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.631 |
trd_0866 | trd_1161 | trd_0866 | trd_1161 | Conserved hypothetical protein. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.620 |
trd_0866 | trd_1162 | trd_0866 | trd_1162 | Conserved hypothetical protein. | Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240. | 0.645 |
trd_0868 | trd_0866 | trd_0868 | trd_0866 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.957 |
trd_0868 | trd_1144 | trd_0868 | trd_1144 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.672 |
trd_0868 | trd_1161 | trd_0868 | trd_1161 | Conserved hypothetical protein. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.569 |
trd_0868 | trd_1162 | trd_0868 | trd_1162 | Conserved hypothetical protein. | Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240. | 0.609 |
trd_1144 | trd_0005 | trd_1144 | trd_0005 | Conserved hypothetical protein. | Tetratricopeptide repeat family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.490 |
trd_1144 | trd_0866 | trd_1144 | trd_0866 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.631 |
trd_1144 | trd_0868 | trd_1144 | trd_0868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.672 |
trd_1144 | trd_1161 | trd_1144 | trd_1161 | Conserved hypothetical protein. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.492 |