trd_1542 protein (Thermomicrobium roseum) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

trd_1542

Putative membrane protein. (183 aa)

Predicted Functional Partners:

trd_1541

0.787

trd_1544

0.776

trd_0193

0.700

trd_0761

0.688

trd_0825

0.635

trd_1268

0.615

trd_1665

0.600

trd_0191

0.591

trd_1271

0.591

trd_1883

0.579

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
trd_0191	trd_0193	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Prenyltransferase and squalene oxidase repeat domain protein.	0.948
trd_0191	trd_0761	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Conserved hypothetical protein.	0.412
trd_0191	trd_0825	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Putative membrane protein.	0.454
trd_0191	trd_1271	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Similar to A. fulgidus predicted coding region.	0.528
trd_0191	trd_1542	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Putative membrane protein.	0.591
trd_0191	trd_1665	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.688
trd_0191	trd_1883	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	Putative multidrug-efflux transporter; Identified by match to protein family HMM PF07690.	0.473
trd_0193	trd_0191	Prenyltransferase and squalene oxidase repeat domain protein.	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	0.948
trd_0193	trd_0761	Prenyltransferase and squalene oxidase repeat domain protein.	Conserved hypothetical protein.	0.433
trd_0193	trd_0825	Prenyltransferase and squalene oxidase repeat domain protein.	Putative membrane protein.	0.663
trd_0193	trd_1271	Prenyltransferase and squalene oxidase repeat domain protein.	Similar to A. fulgidus predicted coding region.	0.732
trd_0193	trd_1542	Prenyltransferase and squalene oxidase repeat domain protein.	Putative membrane protein.	0.700
trd_0193	trd_1665	Prenyltransferase and squalene oxidase repeat domain protein.	Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.761
trd_0193	trd_1883	Prenyltransferase and squalene oxidase repeat domain protein.	Putative multidrug-efflux transporter; Identified by match to protein family HMM PF07690.	0.681
trd_0761	trd_0191	Conserved hypothetical protein.	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	0.412
trd_0761	trd_0193	Conserved hypothetical protein.	Prenyltransferase and squalene oxidase repeat domain protein.	0.433
trd_0761	trd_1542	Conserved hypothetical protein.	Putative membrane protein.	0.688
trd_0825	trd_0191	Putative membrane protein.	Putative Cobalt transport protein; Identified by match to protein family HMM PF02361.	0.454
trd_0825	trd_0193	Putative membrane protein.	Prenyltransferase and squalene oxidase repeat domain protein.	0.663
trd_0825	trd_1271	Putative membrane protein.	Similar to A. fulgidus predicted coding region.	0.788