Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| glgA | glgB | trd_1258 | trd_1933 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.999 |
| glgA | glgE | trd_1258 | trd_1930 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.940 |
| glgA | trd_0082 | trd_1258 | trd_0082 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | alpha-D-1,4-glucosidase; Identified by match to protein family HMM PF00128. | 0.747 |
| glgA | trd_0944 | trd_1258 | trd_0944 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Putative trehalose phosphorylase; Identified by match to protein family HMM PF00534. | 0.914 |
| glgA | trd_1931 | trd_1258 | trd_1931 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Alpha amylase, catalytic subdomain; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 0.829 |
| glgA | treY | trd_1258 | trd_1932 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase; Identified by match to protein family HMM PF02446. | 0.969 |
| glgB | glgA | trd_1933 | trd_1258 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.999 |
| glgB | glgE | trd_1933 | trd_1930 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.987 |
| glgB | otsB | trd_1933 | trd_0884 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.514 |
| glgB | trd_0944 | trd_1933 | trd_0944 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Putative trehalose phosphorylase; Identified by match to protein family HMM PF00534. | 0.572 |
| glgB | trd_1824 | trd_1933 | trd_1824 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycosyl hydrolase, family 15; Identified by match to protein family HMM PF00723. | 0.924 |
| glgB | trd_1931 | trd_1933 | trd_1931 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Alpha amylase, catalytic subdomain; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 0.995 |
| glgB | trd_1935 | trd_1933 | trd_1935 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065. | 0.800 |
| glgB | treY | trd_1933 | trd_1932 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase; Identified by match to protein family HMM PF02446. | 0.999 |
| glgE | glgA | trd_1930 | trd_1258 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.940 |
| glgE | glgB | trd_1930 | trd_1933 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.987 |
| glgE | trd_0080 | trd_1930 | trd_0080 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Putative integral membrane protein. | 0.708 |
| glgE | trd_1931 | trd_1930 | trd_1931 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Alpha amylase, catalytic subdomain; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 0.991 |
| glgE | trd_1935 | trd_1930 | trd_1935 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065. | 0.787 |
| glgE | treY | trd_1930 | trd_1932 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase; Identified by match to protein family HMM PF02446. | 0.991 |
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