Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTN_0841 | atpA | CTN_0841 | CTN_0846 | F-ATPase I-subunit. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.976 |
CTN_0841 | atpB | CTN_0841 | CTN_0842 | F-ATPase I-subunit. | ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.981 |
CTN_0841 | atpC | CTN_0841 | CTN_0849 | F-ATPase I-subunit. | F-ATPase epsilon-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.976 |
CTN_0841 | atpD | CTN_0841 | CTN_0848 | F-ATPase I-subunit. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.976 |
CTN_0841 | atpE | CTN_0841 | CTN_0843 | F-ATPase I-subunit. | ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.979 |
CTN_0841 | atpF | CTN_0841 | CTN_0844 | F-ATPase I-subunit. | ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.976 |
CTN_0841 | atpG | CTN_0841 | CTN_0847 | F-ATPase I-subunit. | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.978 |
CTN_0841 | atpH | CTN_0841 | CTN_0845 | F-ATPase I-subunit. | F-ATPase delta-subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.976 |
CTN_0917 | CTN_1587 | CTN_0917 | CTN_1587 | V-ATPase F-subunit. | Helicase domain protein. | 0.653 |
CTN_0917 | atpA | CTN_0917 | CTN_0846 | V-ATPase F-subunit. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.993 |
CTN_0917 | atpB | CTN_0917 | CTN_0842 | V-ATPase F-subunit. | ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.994 |
CTN_0917 | atpC | CTN_0917 | CTN_0849 | V-ATPase F-subunit. | F-ATPase epsilon-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.992 |
CTN_0917 | atpD | CTN_0917 | CTN_0848 | V-ATPase F-subunit. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.992 |
CTN_0917 | atpE | CTN_0917 | CTN_0843 | V-ATPase F-subunit. | ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.540 |
CTN_0917 | atpF | CTN_0917 | CTN_0844 | V-ATPase F-subunit. | ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.983 |
CTN_0917 | atpG | CTN_0917 | CTN_0847 | V-ATPase F-subunit. | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.992 |
CTN_0917 | atpH | CTN_0917 | CTN_0845 | V-ATPase F-subunit. | F-ATPase delta-subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.992 |
CTN_1587 | CTN_0917 | CTN_1587 | CTN_0917 | Helicase domain protein. | V-ATPase F-subunit. | 0.653 |
CTN_1587 | atpA | CTN_1587 | CTN_0846 | Helicase domain protein. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.939 |
CTN_1587 | atpB | CTN_1587 | CTN_0842 | Helicase domain protein. | ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.746 |
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