node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acpP | rluD | SRU_2754 | SRU_1189 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.734 |
acpP | rplK | SRU_2754 | SRU_1762 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L11, putative; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.940 |
acpP | rplM | SRU_2754 | SRU_0038 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.960 |
acpP | rplO | SRU_2754 | SRU_1053 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.904 |
acpP | rplQ | SRU_2754 | SRU_1061 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.958 |
acpP | rplU | SRU_2754 | SRU_1420 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.980 |
acpP | rsfS | SRU_2754 | SRU_2548 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Domain of unknown function DUF143 family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.901 |
acpP | trmE | SRU_2754 | SRU_0056 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.813 |
gidA | rsmG | SRU_0060 | SRU_0061 | Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Glucose inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.979 |
gidA | trmE | SRU_0060 | SRU_0056 | Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.997 |
rluD | acpP | SRU_1189 | SRU_2754 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.734 |
rluD | rplK | SRU_1189 | SRU_1762 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L11, putative; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.744 |
rluD | rplM | SRU_1189 | SRU_0038 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.745 |
rluD | rplO | SRU_1189 | SRU_1053 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.746 |
rluD | rplQ | SRU_1189 | SRU_1061 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.759 |
rluD | rplU | SRU_1189 | SRU_1420 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.839 |
rluD | rsfS | SRU_1189 | SRU_2548 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Domain of unknown function DUF143 family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.803 |
rluD | trmE | SRU_1189 | SRU_0056 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.830 |
rplK | acpP | SRU_1762 | SRU_2754 | Ribosomal protein L11, putative; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.940 |
rplK | rluD | SRU_1762 | SRU_1189 | Ribosomal protein L11, putative; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.744 |