Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC115247568 | brip1 | ENSTRUP00000014432 | ENSTRUP00000084791 | General transcription factor IIH subunit. | BRCA1 interacting protein C-terminal helicase 1. | 0.910 |
LOC115247568 | ercc3 | ENSTRUP00000014432 | ENSTRUP00000049385 | General transcription factor IIH subunit. | Excision repair cross-complementation group 3. | 0.998 |
LOC115247568 | gtf2h1 | ENSTRUP00000014432 | ENSTRUP00000022842 | General transcription factor IIH subunit. | General transcription factor IIH, polypeptide 1. | 0.999 |
LOC115247568 | mnat1 | ENSTRUP00000014432 | ENSTRUP00000027110 | General transcription factor IIH subunit. | MNAT1 component of CDK activating kinase. | 0.998 |
bard1 | brca1 | ENSTRUP00000037470 | ENSTRUP00000050269 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.999 |
bard1 | brca2 | ENSTRUP00000037470 | ENSTRUP00000015030 | BRCA1 associated RING domain 1. | BRCA2 DNA repair associated. | 0.959 |
bard1 | brip1 | ENSTRUP00000037470 | ENSTRUP00000084791 | BRCA1 associated RING domain 1. | BRCA1 interacting protein C-terminal helicase 1. | 0.914 |
bard1 | pms2 | ENSTRUP00000037470 | ENSTRUP00000043000 | BRCA1 associated RING domain 1. | PMS1 homolog 2, mismatch repair system component. | 0.491 |
bard1 | slf1 | ENSTRUP00000037470 | ENSTRUP00000069114 | BRCA1 associated RING domain 1. | SMC5-SMC6 complex localization factor protein 1. | 0.993 |
bard1 | topbp1 | ENSTRUP00000037470 | ENSTRUP00000016012 | BRCA1 associated RING domain 1. | DNA topoisomerase II binding protein 1. | 0.978 |
brca1 | bard1 | ENSTRUP00000050269 | ENSTRUP00000037470 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.999 |
brca1 | brca2 | ENSTRUP00000050269 | ENSTRUP00000015030 | Uncharacterized protein. | BRCA2 DNA repair associated. | 0.997 |
brca1 | brip1 | ENSTRUP00000050269 | ENSTRUP00000084791 | Uncharacterized protein. | BRCA1 interacting protein C-terminal helicase 1. | 0.990 |
brca1 | pms2 | ENSTRUP00000050269 | ENSTRUP00000043000 | Uncharacterized protein. | PMS1 homolog 2, mismatch repair system component. | 0.631 |
brca1 | slf1 | ENSTRUP00000050269 | ENSTRUP00000069114 | Uncharacterized protein. | SMC5-SMC6 complex localization factor protein 1. | 0.909 |
brca1 | topbp1 | ENSTRUP00000050269 | ENSTRUP00000016012 | Uncharacterized protein. | DNA topoisomerase II binding protein 1. | 0.983 |
brca2 | bard1 | ENSTRUP00000015030 | ENSTRUP00000037470 | BRCA2 DNA repair associated. | BRCA1 associated RING domain 1. | 0.959 |
brca2 | brca1 | ENSTRUP00000015030 | ENSTRUP00000050269 | BRCA2 DNA repair associated. | Uncharacterized protein. | 0.997 |
brca2 | brip1 | ENSTRUP00000015030 | ENSTRUP00000084791 | BRCA2 DNA repair associated. | BRCA1 interacting protein C-terminal helicase 1. | 0.978 |
brca2 | pms2 | ENSTRUP00000015030 | ENSTRUP00000043000 | BRCA2 DNA repair associated. | PMS1 homolog 2, mismatch repair system component. | 0.605 |
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