Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101070584 | MEF2D | ENSTRUP00000048532 | ENSTRUP00000087808 | MADS-box domain-containing protein. | Myocyte enhancer factor 2D. | 0.903 |
LOC101070584 | cabin1 | ENSTRUP00000048532 | ENSTRUP00000042023 | MADS-box domain-containing protein. | Calcineurin binding protein 1. | 0.543 |
LOC101070584 | mef2b | ENSTRUP00000048532 | ENSTRUP00000046462 | MADS-box domain-containing protein. | Myocyte enhancer factor 2b. | 0.907 |
LOC101070584 | myf5 | ENSTRUP00000048532 | ENSTRUP00000027204 | MADS-box domain-containing protein. | Myogenic factor. | 0.454 |
LOC101070584 | myf6 | ENSTRUP00000048532 | ENSTRUP00000027394 | MADS-box domain-containing protein. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.511 |
LOC101070584 | myod | ENSTRUP00000048532 | ENSTRUP00000042483 | MADS-box domain-containing protein. | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | 0.454 |
LOC101070584 | myog | ENSTRUP00000048532 | ENSTRUP00000002802 | MADS-box domain-containing protein. | Myogenin. | 0.517 |
LOC101070584 | nkx2-5 | ENSTRUP00000048532 | ENSTRUP00000027268 | MADS-box domain-containing protein. | NK2 homeobox 5. | 0.616 |
MEF2D | LOC101070584 | ENSTRUP00000087808 | ENSTRUP00000048532 | Myocyte enhancer factor 2D. | MADS-box domain-containing protein. | 0.903 |
MEF2D | cabin1 | ENSTRUP00000087808 | ENSTRUP00000042023 | Myocyte enhancer factor 2D. | Calcineurin binding protein 1. | 0.653 |
MEF2D | mef2a | ENSTRUP00000087808 | ENSTRUP00000057110 | Myocyte enhancer factor 2D. | Myocyte enhancer factor 2aa. | 0.576 |
MEF2D | mef2b | ENSTRUP00000087808 | ENSTRUP00000046462 | Myocyte enhancer factor 2D. | Myocyte enhancer factor 2b. | 0.970 |
MEF2D | mef2c | ENSTRUP00000087808 | ENSTRUP00000069196 | Myocyte enhancer factor 2D. | Myocyte enhancer factor 2cb. | 0.574 |
MEF2D | myf5 | ENSTRUP00000087808 | ENSTRUP00000027204 | Myocyte enhancer factor 2D. | Myogenic factor. | 0.652 |
MEF2D | myf6 | ENSTRUP00000087808 | ENSTRUP00000027394 | Myocyte enhancer factor 2D. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.635 |
MEF2D | myod | ENSTRUP00000087808 | ENSTRUP00000042483 | Myocyte enhancer factor 2D. | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | 0.639 |
MEF2D | myog | ENSTRUP00000087808 | ENSTRUP00000002802 | Myocyte enhancer factor 2D. | Myogenin. | 0.794 |
MEF2D | nkx2-5 | ENSTRUP00000087808 | ENSTRUP00000027268 | Myocyte enhancer factor 2D. | NK2 homeobox 5. | 0.616 |
cabin1 | LOC101070584 | ENSTRUP00000042023 | ENSTRUP00000048532 | Calcineurin binding protein 1. | MADS-box domain-containing protein. | 0.543 |
cabin1 | MEF2D | ENSTRUP00000042023 | ENSTRUP00000087808 | Calcineurin binding protein 1. | Myocyte enhancer factor 2D. | 0.653 |
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