Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101076730 | cdh22 | ENSTRUP00000018928 | ENSTRUP00000061983 | Peroxisomal biogenesis factor 11 alpha. | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | 0.402 |
LOC101076730 | glrx2 | ENSTRUP00000018928 | ENSTRUP00000007146 | Peroxisomal biogenesis factor 11 alpha. | Glutaredoxin 2. | 0.403 |
LOC101076730 | pex11b | ENSTRUP00000018928 | ENSTRUP00000011433 | Peroxisomal biogenesis factor 11 alpha. | Peroxisomal biogenesis factor 11 beta. | 0.903 |
LOC101077861 | cdh22 | ENSTRUP00000067844 | ENSTRUP00000061983 | Catenin (cadherin-associated protein), delta 2a. | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | 0.406 |
LOC101077861 | ctnnb1 | ENSTRUP00000067844 | ENSTRUP00000008263 | Catenin (cadherin-associated protein), delta 2a. | Catenin (cadherin-associated protein), beta 1. | 0.696 |
PKP4 | cdh22 | ENSTRUP00000084213 | ENSTRUP00000061983 | Plakophilin 4. | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | 0.406 |
PKP4 | ctnnb1 | ENSTRUP00000084213 | ENSTRUP00000008263 | Plakophilin 4. | Catenin (cadherin-associated protein), beta 1. | 0.696 |
ankrd29 | cdh22 | ENSTRUP00000041365 | ENSTRUP00000061983 | Ankyrin repeat domain 29. | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | 0.452 |
ankrd29 | tmem241 | ENSTRUP00000041365 | ENSTRUP00000072369 | Ankyrin repeat domain 29. | Uncharacterized protein. | 0.571 |
cdh22 | LOC101076730 | ENSTRUP00000061983 | ENSTRUP00000018928 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Peroxisomal biogenesis factor 11 alpha. | 0.402 |
cdh22 | LOC101077861 | ENSTRUP00000061983 | ENSTRUP00000067844 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Catenin (cadherin-associated protein), delta 2a. | 0.406 |
cdh22 | PKP4 | ENSTRUP00000061983 | ENSTRUP00000084213 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Plakophilin 4. | 0.406 |
cdh22 | ankrd29 | ENSTRUP00000061983 | ENSTRUP00000041365 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Ankyrin repeat domain 29. | 0.452 |
cdh22 | ctnnb1 | ENSTRUP00000061983 | ENSTRUP00000008263 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Catenin (cadherin-associated protein), beta 1. | 0.513 |
cdh22 | ctnnd2 | ENSTRUP00000061983 | ENSTRUP00000073211 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Catenin (cadherin-associated protein), delta 2b. | 0.406 |
cdh22 | glrx2 | ENSTRUP00000061983 | ENSTRUP00000007146 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Glutaredoxin 2. | 0.560 |
cdh22 | ncoa5 | ENSTRUP00000061983 | ENSTRUP00000046837 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Nuclear receptor coactivator 5. | 0.475 |
cdh22 | pex11b | ENSTRUP00000061983 | ENSTRUP00000011433 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Peroxisomal biogenesis factor 11 beta. | 0.402 |
cdh22 | tmem241 | ENSTRUP00000061983 | ENSTRUP00000072369 | Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins. | Uncharacterized protein. | 0.563 |
ctnnb1 | LOC101077861 | ENSTRUP00000008263 | ENSTRUP00000067844 | Catenin (cadherin-associated protein), beta 1. | Catenin (cadherin-associated protein), delta 2a. | 0.696 |
page 1 of 2