STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmrt1DM domain-containing protein. (295 aa)    
Predicted Functional Partners:
amh
TGF_BETA_2 domain-containing protein.
      
 0.811
pfcyp19a
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 
 0.810
LOC101064892
SRY-box transcription factor 9b.
    
 0.758
kptn
Kaptin (actin binding protein).
    
 0.706
depdc5
DEP domain containing 5.
   
 0.684
wdr59
WD repeat domain 59.
    
 0.676
wdr24
WD repeat domain 24.
    
 0.673
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.668
msh4
MutS homolog 4.
    
 
 0.655
LOC101075863
Cytochrome P450, family 11, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.652
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.