STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmtc4Transmembrane O-mannosyltransferase targeting cadherins 4. (741 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.860
ints1
Integrator complex subunit 1.
    
 0.851
ints13
Integrator complex subunit 13.
   
 0.849
ints3
Si:dkey-27c15.3.
    
 0.820
ints5
Integrator complex subunit 5.
    
 0.820
ints10
Integrator complex subunit 10.
   
 0.809
ints9
Integrator complex subunit 9.
  
 0.755
ints11
Integrator complex subunit 11.
  
 0.732
ints12
Integrator complex subunit 12.
   
 0.705
LOC101069300
Integrator complex subunit 6 like.
   
 0.673
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.