STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS57119.1Sulfur-oxidizing protein SoxA. (284 aa)    
Predicted Functional Partners:
SFS57146.1
Sulfur-oxidizing protein SoxX.
 
 
 
 0.999
SoxC
Sulfur dehydrogenase subunit SoxC.
 
 
 
 0.990
SoxZ
Sulfur-oxidizing protein SoxZ.
 
   
 0.981
SoxY
Thiosulfate-binding protein SoxY.
 
   
 0.980
SFS57085.1
Sulfur dehydrogenase subunit SoxD.
 
   
 0.979
SoxB
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
   
 0.950
SFT26422.1
Nitric oxide reductase subunit C.
   
 
 0.909
SFS57153.1
Thioredoxin-related protein.
 
     0.881
SFS57066.1
Protein of unknown function DUF302.
 
     0.876
SFS57171.1
Hypothetical protein.
 
     0.840
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.