STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS91801.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SFS91815.1
Thioredoxin.
 
  
 0.919
SFS91789.1
Hypothetical protein; Belongs to the UPF0434 family.
       0.863
SFS71916.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.815
SFT17709.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.815
SFS45622.1
DNA repair exonuclease SbcCD nuclease subunit.
  
 0.813
SFS45640.1
DNA repair exonuclease SbcCD ATPase subunit.
    
 0.691
SFS52735.1
Hypothetical protein.
    
 0.691
SFS91855.1
Exodeoxyribonuclease-3.
       0.655
SFS91831.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
       0.534
SFS91843.1
Cardiolipin synthase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.530
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.