Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_0522 | Avi_0523 | Avi_0522 | Avi_0523 | Two component sensor kinase/response regulator hybrid. | Response regulator protein. | 0.829 |
Avi_0522 | Avi_0525 | Avi_0522 | Avi_0525 | Two component sensor kinase/response regulator hybrid. | GGDEF family protein. | 0.673 |
Avi_0522 | Avi_1249 | Avi_0522 | Avi_1249 | Two component sensor kinase/response regulator hybrid. | GGDEF family protein. | 0.806 |
Avi_0522 | Avi_2075 | Avi_0522 | Avi_2075 | Two component sensor kinase/response regulator hybrid. | GGDEF protein. | 0.630 |
Avi_0522 | Avi_2229 | Avi_0522 | Avi_2229 | Two component sensor kinase/response regulator hybrid. | GGDEF domain protein. | 0.968 |
Avi_0522 | Avi_3353 | Avi_0522 | Avi_3353 | Two component sensor kinase/response regulator hybrid. | GGDEF family protein. | 0.976 |
Avi_0522 | Avi_3451 | Avi_0522 | Avi_3451 | Two component sensor kinase/response regulator hybrid. | GGDEF family protein. | 0.968 |
Avi_0522 | Avi_5096 | Avi_0522 | Avi_5096 | Two component sensor kinase/response regulator hybrid. | GGDEF family protein. | 0.869 |
Avi_0522 | pleD-2 | Avi_0522 | Avi_0610 | Two component sensor kinase/response regulator hybrid. | Two component response regulator. | 0.885 |
Avi_0522 | pleD-4 | Avi_0522 | Avi_3988 | Two component sensor kinase/response regulator hybrid. | Two component response regulator. | 0.577 |
Avi_0523 | Avi_0522 | Avi_0523 | Avi_0522 | Response regulator protein. | Two component sensor kinase/response regulator hybrid. | 0.829 |
Avi_0523 | Avi_0525 | Avi_0523 | Avi_0525 | Response regulator protein. | GGDEF family protein. | 0.781 |
Avi_0523 | Avi_1249 | Avi_0523 | Avi_1249 | Response regulator protein. | GGDEF family protein. | 0.705 |
Avi_0523 | Avi_2075 | Avi_0523 | Avi_2075 | Response regulator protein. | GGDEF protein. | 0.751 |
Avi_0523 | Avi_2229 | Avi_0523 | Avi_2229 | Response regulator protein. | GGDEF domain protein. | 0.859 |
Avi_0523 | Avi_3353 | Avi_0523 | Avi_3353 | Response regulator protein. | GGDEF family protein. | 0.774 |
Avi_0523 | Avi_3451 | Avi_0523 | Avi_3451 | Response regulator protein. | GGDEF family protein. | 0.757 |
Avi_0523 | Avi_5096 | Avi_0523 | Avi_5096 | Response regulator protein. | GGDEF family protein. | 0.725 |
Avi_0523 | pleD-2 | Avi_0523 | Avi_0610 | Response regulator protein. | Two component response regulator. | 0.730 |
Avi_0523 | pleD-4 | Avi_0523 | Avi_3988 | Response regulator protein. | Two component response regulator. | 0.846 |
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