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Avi_1161 protein (Agrobacterium vitis) - STRING interaction network
"Avi_1161" - annotation not available in Agrobacterium vitis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avi_1161annotation not available (637 aa)    
Predicted Functional Partners:
Avi_1160
annotation not available (630 aa)
 
       
0.863
Avi_3866
annotation not available (1677 aa)
 
      0.613
Avi_3865
annotation not available (503 aa)
 
      0.598
Avi_1162
annotation not available (633 aa)
 
       
0.564
pheT
annotation not available (807 aa)
     
      0.452
pheS
annotation not available (361 aa)
       
      0.426
prp1
annotation not available (259 aa)
   
 
      0.421
Avi_3091
annotation not available (680 aa)
 
   
0.421
Your Current Organism:
Agrobacterium vitis
NCBI taxonomy Id: 311402
Other names: A. vitis S4, Agrobacterium vitis, Agrobacterium vitis S4, Agrobacterium vitis str. S4, Agrobacterium vitis strain S4
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