STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avi_2036NADPH:quinone reductase. (342 aa)    
Predicted Functional Partners:
adhP
Alcohol dehydrogenase.
 
 
0.920
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Avi_3559
Aldehyde dehydrogenase.
   
 0.910
vdh-3
Vanillin: NAD oxidoreductase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Avi_5673
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
Avi_5719
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
vdh-4
Vanillin: NAD oxidoreductase; Belongs to the aldehyde dehydrogenase family.
   
 0.910
adhC
Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.908
Avi_2873
Amine oxidase flavin-containing.
  
 
 0.904
Avi_2033
3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.899
Your Current Organism:
Agrobacterium vitis
NCBI taxonomy Id: 311402
Other names: A. vitis S4, Agrobacterium vitis S4, Agrobacterium vitis str. S4, Agrobacterium vitis strain S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.