Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_1086 | Avi_2579 | Avi_1086 | Avi_2579 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.418 |
Avi_1086 | Avi_3865 | Avi_1086 | Avi_3865 | Conserved hypothetical protein. | TPR repeat protein. | 0.833 |
Avi_1086 | Avi_3866 | Avi_1086 | Avi_3866 | Conserved hypothetical protein. | TPR repeat protein. | 0.794 |
Avi_1086 | ina | Avi_1086 | Avi_3090 | Conserved hypothetical protein. | Ice nucleation protein. | 0.609 |
Avi_2578 | Avi_2579 | Avi_2578 | Avi_2579 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Avi_2579 | Avi_1086 | Avi_2579 | Avi_1086 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.418 |
Avi_2579 | Avi_2578 | Avi_2579 | Avi_2578 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Avi_2579 | Avi_2750 | Avi_2579 | Avi_2750 | Conserved hypothetical protein. | Hypothetical protein. | 0.438 |
Avi_2579 | Avi_3865 | Avi_2579 | Avi_3865 | Conserved hypothetical protein. | TPR repeat protein. | 0.698 |
Avi_2579 | Avi_3866 | Avi_2579 | Avi_3866 | Conserved hypothetical protein. | TPR repeat protein. | 0.690 |
Avi_2579 | ina | Avi_2579 | Avi_3090 | Conserved hypothetical protein. | Ice nucleation protein. | 0.565 |
Avi_2750 | Avi_2579 | Avi_2750 | Avi_2579 | Hypothetical protein. | Conserved hypothetical protein. | 0.438 |
Avi_2750 | Avi_3865 | Avi_2750 | Avi_3865 | Hypothetical protein. | TPR repeat protein. | 0.718 |
Avi_2750 | Avi_3866 | Avi_2750 | Avi_3866 | Hypothetical protein. | TPR repeat protein. | 0.718 |
Avi_3865 | Avi_1086 | Avi_3865 | Avi_1086 | TPR repeat protein. | Conserved hypothetical protein. | 0.833 |
Avi_3865 | Avi_2579 | Avi_3865 | Avi_2579 | TPR repeat protein. | Conserved hypothetical protein. | 0.698 |
Avi_3865 | Avi_2750 | Avi_3865 | Avi_2750 | TPR repeat protein. | Hypothetical protein. | 0.718 |
Avi_3865 | Avi_3866 | Avi_3865 | Avi_3866 | TPR repeat protein. | TPR repeat protein. | 0.963 |
Avi_3865 | ina | Avi_3865 | Avi_3090 | TPR repeat protein. | Ice nucleation protein. | 0.614 |
Avi_3866 | Avi_1086 | Avi_3866 | Avi_1086 | TPR repeat protein. | Conserved hypothetical protein. | 0.794 |
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