Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_0522 | Avi_5046 | Avi_0522 | Avi_5046 | Two component sensor kinase/response regulator hybrid. | ABC transporter substrate binding protein (ribose). | 0.682 |
Avi_0522 | cvgS | Avi_0522 | Avi_5545 | Two component sensor kinase/response regulator hybrid. | Two component sensor kinase/response regulator hybrid. | 0.981 |
Avi_5042 | Avi_5046 | Avi_5042 | Avi_5046 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter substrate binding protein (ribose). | 0.947 |
Avi_5042 | Avi_5049 | Avi_5042 | Avi_5049 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter nucleotide binding/ATPase protein (ribose). | 0.914 |
Avi_5042 | Avi_5050 | Avi_5042 | Avi_5050 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.753 |
Avi_5042 | Avi_5051 | Avi_5042 | Avi_5051 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.974 |
Avi_5042 | Avi_6097 | Avi_5042 | Avi_6097 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family. | 0.966 |
Avi_5042 | rbsC-6 | Avi_5042 | Avi_6098 | ABC transporter nucleotide binding/ATPase protein (sugar). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.835 |
Avi_5046 | Avi_0522 | Avi_5046 | Avi_0522 | ABC transporter substrate binding protein (ribose). | Two component sensor kinase/response regulator hybrid. | 0.682 |
Avi_5046 | Avi_5042 | Avi_5046 | Avi_5042 | ABC transporter substrate binding protein (ribose). | ABC transporter nucleotide binding/ATPase protein (sugar). | 0.947 |
Avi_5046 | Avi_5049 | Avi_5046 | Avi_5049 | ABC transporter substrate binding protein (ribose). | ABC transporter nucleotide binding/ATPase protein (ribose). | 0.992 |
Avi_5046 | Avi_5050 | Avi_5046 | Avi_5050 | ABC transporter substrate binding protein (ribose). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.987 |
Avi_5046 | Avi_5051 | Avi_5046 | Avi_5051 | ABC transporter substrate binding protein (ribose). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.993 |
Avi_5046 | Avi_6097 | Avi_5046 | Avi_6097 | ABC transporter substrate binding protein (ribose). | ABC transporter membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family. | 0.664 |
Avi_5046 | cvgS | Avi_5046 | Avi_5545 | ABC transporter substrate binding protein (ribose). | Two component sensor kinase/response regulator hybrid. | 0.696 |
Avi_5046 | gguA | Avi_5046 | Avi_3905 | ABC transporter substrate binding protein (ribose). | ABC transporter nucleotide binding/ATPase protein (sugar). | 0.776 |
Avi_5046 | gguB | Avi_5046 | Avi_3906 | ABC transporter substrate binding protein (ribose). | ABC transporter membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family. | 0.710 |
Avi_5046 | rbsC-6 | Avi_5046 | Avi_6098 | ABC transporter substrate binding protein (ribose). | ABC transporter membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.679 |
Avi_5049 | Avi_5042 | Avi_5049 | Avi_5042 | ABC transporter nucleotide binding/ATPase protein (ribose). | ABC transporter nucleotide binding/ATPase protein (sugar). | 0.914 |
Avi_5049 | Avi_5046 | Avi_5049 | Avi_5046 | ABC transporter nucleotide binding/ATPase protein (ribose). | ABC transporter substrate binding protein (ribose). | 0.992 |
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