Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0790 | pyrD | Arad_0790 | Arad_0791 | Conserved hypothetical protein. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.804 |
Arad_1896 | Arad_7942 | Arad_1896 | Arad_7942 | Dihydroorotase protein. | Amidohydrolase protein. | 0.900 |
Arad_1896 | carA | Arad_1896 | Arad_3127 | Dihydroorotase protein. | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | 0.981 |
Arad_1896 | carB | Arad_1896 | Arad_3135 | Dihydroorotase protein. | Carbamoyl-phosphate synthase large chain (ammonia chain) protein; Belongs to the CarB family. | 0.981 |
Arad_1896 | pyrB | Arad_1896 | Arad_1897 | Dihydroorotase protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Arad_1896 | pyrC | Arad_1896 | Arad_0740 | Dihydroorotase protein. | Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.913 |
Arad_1896 | pyrD | Arad_1896 | Arad_0791 | Dihydroorotase protein. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.970 |
Arad_1896 | pyrE | Arad_1896 | Arad_0742 | Dihydroorotase protein. | Orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.747 |
Arad_1896 | pyrF | Arad_1896 | Arad_0538 | Dihydroorotase protein. | Orotidine 5'-phosphate decarboxylase protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.775 |
Arad_7942 | Arad_1896 | Arad_7942 | Arad_1896 | Amidohydrolase protein. | Dihydroorotase protein. | 0.900 |
Arad_7942 | pyrB | Arad_7942 | Arad_1897 | Amidohydrolase protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
Arad_7942 | pyrC | Arad_7942 | Arad_0740 | Amidohydrolase protein. | Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.900 |
Arad_7942 | pyrD | Arad_7942 | Arad_0791 | Amidohydrolase protein. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
carA | Arad_1896 | Arad_3127 | Arad_1896 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Dihydroorotase protein. | 0.981 |
carA | carB | Arad_3127 | Arad_3135 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Carbamoyl-phosphate synthase large chain (ammonia chain) protein; Belongs to the CarB family. | 0.999 |
carA | pheT | Arad_3127 | Arad_0445 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | phenylalanyl-tRNA synthetase; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.552 |
carA | pyrB | Arad_3127 | Arad_1897 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carA | pyrC | Arad_3127 | Arad_0740 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.675 |
carA | pyrD | Arad_3127 | Arad_0791 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.878 |
carA | pyrE | Arad_3127 | Arad_0742 | Carbamoyl-phosphate synthase small chain (glutamine-hydrolysing) protein; Belongs to the CarA family. | Orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.903 |
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