Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0804 | Arad_1381 | Arad_0804 | Arad_1381 | Phosphoesterase protein. | mRNA processing exonuclease. | 0.803 |
Arad_0804 | Arad_1382 | Arad_0804 | Arad_1382 | Phosphoesterase protein. | DNA ligase (ATP) protein. | 0.832 |
Arad_0804 | lhr | Arad_0804 | Arad_0803 | Phosphoesterase protein. | ATP-dependent RNA/DNA helicase protein. | 0.921 |
Arad_1380 | Arad_1381 | Arad_1380 | Arad_1381 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | mRNA processing exonuclease. | 0.686 |
Arad_1380 | Arad_1382 | Arad_1380 | Arad_1382 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | DNA ligase (ATP) protein. | 0.684 |
Arad_1380 | Arad_1383 | Arad_1380 | Arad_1383 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | Aminopeptidase protein. | 0.496 |
Arad_1381 | Arad_0804 | Arad_1381 | Arad_0804 | mRNA processing exonuclease. | Phosphoesterase protein. | 0.803 |
Arad_1381 | Arad_1380 | Arad_1381 | Arad_1380 | mRNA processing exonuclease. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.686 |
Arad_1381 | Arad_1382 | Arad_1381 | Arad_1382 | mRNA processing exonuclease. | DNA ligase (ATP) protein. | 0.981 |
Arad_1381 | Arad_1383 | Arad_1381 | Arad_1383 | mRNA processing exonuclease. | Aminopeptidase protein. | 0.586 |
Arad_1381 | Arad_1836 | Arad_1381 | Arad_1836 | mRNA processing exonuclease. | Serine/threonine-specific protein phosphatase protein. | 0.578 |
Arad_1381 | lhr | Arad_1381 | Arad_0803 | mRNA processing exonuclease. | ATP-dependent RNA/DNA helicase protein. | 0.808 |
Arad_1381 | polA | Arad_1381 | Arad_0271 | mRNA processing exonuclease. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.703 |
Arad_1382 | Arad_0804 | Arad_1382 | Arad_0804 | DNA ligase (ATP) protein. | Phosphoesterase protein. | 0.832 |
Arad_1382 | Arad_1380 | Arad_1382 | Arad_1380 | DNA ligase (ATP) protein. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. | 0.684 |
Arad_1382 | Arad_1381 | Arad_1382 | Arad_1381 | DNA ligase (ATP) protein. | mRNA processing exonuclease. | 0.981 |
Arad_1382 | Arad_1383 | Arad_1382 | Arad_1383 | DNA ligase (ATP) protein. | Aminopeptidase protein. | 0.573 |
Arad_1382 | Arad_1836 | Arad_1382 | Arad_1836 | DNA ligase (ATP) protein. | Serine/threonine-specific protein phosphatase protein. | 0.556 |
Arad_1382 | dnaN | Arad_1382 | Arad_0542 | DNA ligase (ATP) protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.911 |
Arad_1382 | holB | Arad_1382 | Arad_2420 | DNA ligase (ATP) protein. | DNA polymerase III delta prime subunit protein. | 0.640 |
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