Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0785 | Arad_2712 | Arad_0785 | Arad_2712 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.687 |
Arad_0785 | Arad_2713 | Arad_0785 | Arad_2713 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.618 |
Arad_0785 | Arad_7102 | Arad_0785 | Arad_7102 | Amino acid ABC transporter. | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | 0.589 |
Arad_0785 | occPch | Arad_0785 | Arad_7978 | Amino acid ABC transporter. | Octopine ABC transporter. | 0.517 |
Arad_0785 | occPch-2 | Arad_0785 | Arad_8876 | Amino acid ABC transporter. | Octopine ABC transporter. | 0.464 |
Arad_2710 | Arad_2712 | Arad_2710 | Arad_2712 | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter. | 0.898 |
Arad_2710 | Arad_2713 | Arad_2710 | Arad_2713 | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter. | 0.990 |
Arad_2710 | Arad_7346 | Arad_2710 | Arad_7346 | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter. | 0.508 |
Arad_2710 | occPch | Arad_2710 | Arad_7978 | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | Octopine ABC transporter. | 0.674 |
Arad_2710 | occPch-2 | Arad_2710 | Arad_8876 | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | Octopine ABC transporter. | 0.676 |
Arad_2712 | Arad_0785 | Arad_2712 | Arad_0785 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.687 |
Arad_2712 | Arad_2710 | Arad_2712 | Arad_2710 | Amino acid ABC transporter. | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | 0.898 |
Arad_2712 | Arad_2713 | Arad_2712 | Arad_2713 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.927 |
Arad_2712 | Arad_7102 | Arad_2712 | Arad_7102 | Amino acid ABC transporter. | Amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | 0.684 |
Arad_2712 | Arad_7346 | Arad_2712 | Arad_7346 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.791 |
Arad_2712 | Arad_7980 | Arad_2712 | Arad_7980 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.740 |
Arad_2712 | nocT | Arad_2712 | Arad_4801 | Amino acid ABC transporter. | Nopaline binding protein of ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | 0.781 |
Arad_2712 | occPch | Arad_2712 | Arad_7978 | Amino acid ABC transporter. | Octopine ABC transporter. | 0.730 |
Arad_2712 | occPch-2 | Arad_2712 | Arad_8876 | Amino acid ABC transporter. | Octopine ABC transporter. | 0.834 |
Arad_2712 | occT | Arad_2712 | Arad_8875 | Amino acid ABC transporter. | Octopine ABC transporter; Belongs to the bacterial solute-binding protein 3 family. | 0.769 |
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