Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0634 | Arad_3335 | Arad_0634 | Arad_3335 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.925 |
Arad_0634 | Arad_3481 | Arad_0634 | Arad_3481 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.676 |
Arad_0634 | Arad_3932 | Arad_0634 | Arad_3932 | Two-component sensor histidine kinase/response regulator hybrid protein. | Sugar ABC transporter. | 0.652 |
Arad_0634 | Arad_8591 | Arad_0634 | Arad_8591 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.959 |
Arad_0634 | fixL | Arad_0634 | Arad_7578 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.938 |
Arad_2353 | Arad_3932 | Arad_2353 | Arad_3932 | Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | Sugar ABC transporter. | 0.602 |
Arad_2353 | Arad_3935 | Arad_2353 | Arad_3935 | Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | Sugar ABC transporter. | 0.593 |
Arad_3335 | Arad_0634 | Arad_3335 | Arad_0634 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.925 |
Arad_3335 | Arad_3481 | Arad_3335 | Arad_3481 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.905 |
Arad_3335 | Arad_3932 | Arad_3335 | Arad_3932 | Two-component sensor histidine kinase/response regulator hybrid protein. | Sugar ABC transporter. | 0.667 |
Arad_3335 | Arad_8591 | Arad_3335 | Arad_8591 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.960 |
Arad_3335 | fixL | Arad_3335 | Arad_7578 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.943 |
Arad_3481 | Arad_0634 | Arad_3481 | Arad_0634 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.676 |
Arad_3481 | Arad_3335 | Arad_3481 | Arad_3335 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.905 |
Arad_3481 | Arad_3932 | Arad_3481 | Arad_3932 | Two-component sensor histidine kinase protein. | Sugar ABC transporter. | 0.657 |
Arad_3481 | Arad_8591 | Arad_3481 | Arad_8591 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.946 |
Arad_3481 | fixL | Arad_3481 | Arad_7578 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase protein. | 0.928 |
Arad_3930 | Arad_3932 | Arad_3930 | Arad_3932 | Conserved hypothetical protein. | Sugar ABC transporter. | 0.698 |
Arad_3930 | Arad_3934 | Arad_3930 | Arad_3934 | Conserved hypothetical protein. | Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | 0.466 |
Arad_3932 | Arad_0634 | Arad_3932 | Arad_0634 | Sugar ABC transporter. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.652 |
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