Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_7457 | Arad_7462 | Arad_7457 | Arad_7462 | D-erythrulose 4-phosphate dehydrogenase. | Conserved hypothetical protein. | 0.776 |
Arad_7457 | Arad_7464 | Arad_7457 | Arad_7464 | D-erythrulose 4-phosphate dehydrogenase. | Ribose ABC transporter. | 0.567 |
Arad_7457 | Arad_7465 | Arad_7457 | Arad_7465 | D-erythrulose 4-phosphate dehydrogenase. | Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | 0.554 |
Arad_7457 | Arad_7467 | Arad_7457 | Arad_7467 | D-erythrulose 4-phosphate dehydrogenase. | Ribose ABC transporter. | 0.751 |
Arad_7457 | Arad_7468 | Arad_7457 | Arad_7468 | D-erythrulose 4-phosphate dehydrogenase. | Transcriptional regulator protein. | 0.483 |
Arad_7457 | Arad_9233 | Arad_7457 | Arad_9233 | D-erythrulose 4-phosphate dehydrogenase. | Ribose ABC transporter. | 0.518 |
Arad_7457 | Arad_9235 | Arad_7457 | Arad_9235 | D-erythrulose 4-phosphate dehydrogenase. | Conserved hypothetical protein. | 0.702 |
Arad_7462 | Arad_7457 | Arad_7462 | Arad_7457 | Conserved hypothetical protein. | D-erythrulose 4-phosphate dehydrogenase. | 0.776 |
Arad_7462 | Arad_7464 | Arad_7462 | Arad_7464 | Conserved hypothetical protein. | Ribose ABC transporter. | 0.941 |
Arad_7462 | Arad_7465 | Arad_7462 | Arad_7465 | Conserved hypothetical protein. | Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | 0.914 |
Arad_7462 | Arad_7467 | Arad_7462 | Arad_7467 | Conserved hypothetical protein. | Ribose ABC transporter. | 0.876 |
Arad_7462 | Arad_7468 | Arad_7462 | Arad_7468 | Conserved hypothetical protein. | Transcriptional regulator protein. | 0.620 |
Arad_7462 | Arad_9233 | Arad_7462 | Arad_9233 | Conserved hypothetical protein. | Ribose ABC transporter. | 0.730 |
Arad_7464 | Arad_7457 | Arad_7464 | Arad_7457 | Ribose ABC transporter. | D-erythrulose 4-phosphate dehydrogenase. | 0.567 |
Arad_7464 | Arad_7462 | Arad_7464 | Arad_7462 | Ribose ABC transporter. | Conserved hypothetical protein. | 0.941 |
Arad_7464 | Arad_7465 | Arad_7464 | Arad_7465 | Ribose ABC transporter. | Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family. | 0.989 |
Arad_7464 | Arad_7467 | Arad_7464 | Arad_7467 | Ribose ABC transporter. | Ribose ABC transporter. | 0.979 |
Arad_7464 | Arad_7468 | Arad_7464 | Arad_7468 | Ribose ABC transporter. | Transcriptional regulator protein. | 0.490 |
Arad_7464 | Arad_9233 | Arad_7464 | Arad_9233 | Ribose ABC transporter. | Ribose ABC transporter. | 0.945 |
Arad_7464 | Arad_9235 | Arad_7464 | Arad_9235 | Ribose ABC transporter. | Conserved hypothetical protein. | 0.582 |
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