STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsBch3-2Ribose ABC transporter. (309 aa)    
Predicted Functional Partners:
rbsAch3-2
Ribose ABC transporter.
 
  0.990
Arad_8171
Sugar ABC transporter.
  
  0.928
rbsCch4
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.916
Arad_8169
Sugar ABC transporter.
     
  0.900
Arad_7768
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.829
Arad_7769
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.827
Arad_9795
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.825
Arad_4761
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.824
Arad_7529
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.821
Arad_9237
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.821
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.