STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mocBfRhizopine ABC transporter. (309 aa)    
Predicted Functional Partners:
Arad_4761
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.835
rbsCch4
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.777
Arad_7529
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.756
Arad_9237
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.752
Arad_9795
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.742
mcpB
Methyl-accepting chemotaxis protein.
       0.732
Arad_7465
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.729
Arad_7768
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
   0.717
rbsCch1
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.712
fixL
Two-component sensor histidine kinase protein.
   
 
 0.709
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
Server load: low (24%) [HD]