Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_4081 | Arad_9474 | Arad_4081 | Arad_9474 | Aldehyde dehydrogenase protein. | Conserved hypothetical protein. | 0.714 |
Arad_4081 | Arad_9704 | Arad_4081 | Arad_9704 | Aldehyde dehydrogenase protein. | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | 0.949 |
Arad_4411 | Arad_9704 | Arad_4411 | Arad_9704 | Chorismate mutase. | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | 0.454 |
Arad_4411 | dapAb | Arad_4411 | Arad_8792 | Chorismate mutase. | Dihydrodipicolinate synthase protein; Belongs to the DapA family. | 0.454 |
Arad_4411 | dapAch1 | Arad_4411 | Arad_7124 | Chorismate mutase. | Dihydrodipicolinate synthase protein; Belongs to the DapA family. | 0.454 |
Arad_4411 | gatC | Arad_4411 | Arad_1908 | Chorismate mutase. | glutamyl-tRNA amidotransferase subunit C protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.426 |
Arad_9474 | Arad_4081 | Arad_9474 | Arad_4081 | Conserved hypothetical protein. | Aldehyde dehydrogenase protein. | 0.714 |
Arad_9474 | Arad_9704 | Arad_9474 | Arad_9704 | Conserved hypothetical protein. | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | 0.519 |
Arad_9702 | Arad_9704 | Arad_9702 | Arad_9704 | Transcriptional regulator protein. | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | 0.708 |
Arad_9702 | Arad_9705 | Arad_9702 | Arad_9705 | Transcriptional regulator protein. | Exported protein. | 0.423 |
Arad_9702 | uxuAch | Arad_9702 | Arad_9703 | Transcriptional regulator protein. | Mannonate dehydratase protein; Catalyzes the dehydration of D-mannonate. | 0.679 |
Arad_9704 | Arad_4081 | Arad_9704 | Arad_4081 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Aldehyde dehydrogenase protein. | 0.949 |
Arad_9704 | Arad_4411 | Arad_9704 | Arad_4411 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Chorismate mutase. | 0.454 |
Arad_9704 | Arad_9474 | Arad_9704 | Arad_9474 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Conserved hypothetical protein. | 0.519 |
Arad_9704 | Arad_9702 | Arad_9704 | Arad_9702 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Transcriptional regulator protein. | 0.708 |
Arad_9704 | Arad_9705 | Arad_9704 | Arad_9705 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Exported protein. | 0.570 |
Arad_9704 | dapAb | Arad_9704 | Arad_8792 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Dihydrodipicolinate synthase protein; Belongs to the DapA family. | 0.485 |
Arad_9704 | dapAch1 | Arad_9704 | Arad_7124 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Dihydrodipicolinate synthase protein; Belongs to the DapA family. | 0.548 |
Arad_9704 | dapB1 | Arad_9704 | Arad_0295 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | Dihydrodipicolinate reductase protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.640 |
Arad_9704 | gatC | Arad_9704 | Arad_1908 | 5-dehydro-4-deoxyglucarate dehydratase protein; Belongs to the DapA family. | glutamyl-tRNA amidotransferase subunit C protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.438 |
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