STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4VCU1_TETTSSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)    
Predicted Functional Partners:
I7LTE1_TETTS
Splicing factor 3B subunit 3.
   
 0.999
I7MFR0_TETTS
Sm protein B domain protein.
   
 0.999
I7MM90_TETTS
Small nuclear ribonucleoprotein helicase.
   
 0.999
Q22A33_TETTS
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.999
Q232H6_TETTS
U1 small nuclear ribonucleoprotein 70 kDa protein.
   
 0.999
Q23FM4_TETTS
Elongation factor G domain protein.
   
 0.999
Q23FT4_TETTS
Pre-mRNA-processing-splicing factor 8.
   
 0.999
Q24H84_TETTS
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
W7XEA1_TETTS
Small nuclear ribonucleoprotein Sm D3.
   
 0.999
W7XFS7_TETTS
Small nuclear ribonucleoprotein.
   
 0.999
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.