I7LV00_TETTS protein (Tetrahymena thermophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I7LV00_TETTS

Uncharacterized protein. (893 aa)

Predicted Functional Partners:

I7LUX8_TETTS

0.827

I7LZX2_TETTS

0.590

I7M670_TETTS

0.461

Q22WE6_TETTS

0.461

Q23ZH8_TETTS

0.461

Q240J8_TETTS

0.461

I7LV58_TETTS

0.430

W7WVU8_TETTS

0.430

I7LWQ5_TETTS

0.410

I7MMN2_TETTS

0.410

Your Current Organism:

Tetrahymena thermophila

NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I7LUX8_TETTS	I7LV00_TETTS	I7LUX8	I7LV00	LRR and guanylate kinase domain protein.	Uncharacterized protein.	0.827
I7LUX8_TETTS	I7LV58_TETTS	I7LUX8	I7LV58	LRR and guanylate kinase domain protein.	Calponin-like domain protein.	0.832
I7LUX8_TETTS	I7LWQ5_TETTS	I7LUX8	I7LWQ5	LRR and guanylate kinase domain protein.	Dpy-30 motif protein.	0.838
I7LUX8_TETTS	I7LZX2_TETTS	I7LUX8	I7LZX2	LRR and guanylate kinase domain protein.	ASH domain-containing protein.	0.920
I7LUX8_TETTS	I7M670_TETTS	I7LUX8	I7M670	LRR and guanylate kinase domain protein.	Uncharacterized protein.	0.907
I7LUX8_TETTS	Q22WE6_TETTS	I7LUX8	Q22WE6	LRR and guanylate kinase domain protein.	EF-hand domain-containing protein.	0.922
I7LUX8_TETTS	Q23ZH8_TETTS	I7LUX8	Q23ZH8	LRR and guanylate kinase domain protein.	Uncharacterized protein.	0.915
I7LUX8_TETTS	Q240J8_TETTS	I7LUX8	Q240J8	LRR and guanylate kinase domain protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
I7LUX8_TETTS	W7WVU8_TETTS	I7LUX8	W7WVU8	LRR and guanylate kinase domain protein.	Flagellar associated protein, putative.	0.832
I7LV00_TETTS	I7LUX8_TETTS	I7LV00	I7LUX8	Uncharacterized protein.	LRR and guanylate kinase domain protein.	0.827
I7LV00_TETTS	I7LV58_TETTS	I7LV00	I7LV58	Uncharacterized protein.	Calponin-like domain protein.	0.430
I7LV00_TETTS	I7LWQ5_TETTS	I7LV00	I7LWQ5	Uncharacterized protein.	Dpy-30 motif protein.	0.410
I7LV00_TETTS	I7LZX2_TETTS	I7LV00	I7LZX2	Uncharacterized protein.	ASH domain-containing protein.	0.590
I7LV00_TETTS	I7M670_TETTS	I7LV00	I7M670	Uncharacterized protein.	Uncharacterized protein.	0.461
I7LV00_TETTS	I7MMN2_TETTS	I7LV00	I7MMN2	Uncharacterized protein.	Guanylate kinase.	0.410
I7LV00_TETTS	Q22WE6_TETTS	I7LV00	Q22WE6	Uncharacterized protein.	EF-hand domain-containing protein.	0.461
I7LV00_TETTS	Q23ZH8_TETTS	I7LV00	Q23ZH8	Uncharacterized protein.	Uncharacterized protein.	0.461
I7LV00_TETTS	Q240J8_TETTS	I7LV00	Q240J8	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.461
I7LV00_TETTS	W7WVU8_TETTS	I7LV00	W7WVU8	Uncharacterized protein.	Flagellar associated protein, putative.	0.430
I7LV58_TETTS	I7LUX8_TETTS	I7LV58	I7LUX8	Calponin-like domain protein.	LRR and guanylate kinase domain protein.	0.832