STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I7LWD2_TETTSSplicing factor u2af large subunit. (570 aa)    
Predicted Functional Partners:
I7M685_TETTS
U2 snRNP auxiliary factor, small subunit.
   
 0.987
I7LW96_TETTS
RNA recognition motif protein.
  
  
  0.935
I7MK38_TETTS
U2 snRNP auxilliary splicing factor.
  
  
 
0.922
A4VDP3_TETTS
Splicing factor u2af large subunit.
  
  
 
0.919
W7X3L6_TETTS
Myb-like DNA-binding domain protein.
   
 0.809
Q232H6_TETTS
U1 small nuclear ribonucleoprotein 70 kDa protein.
   
 0.806
I7LX62_TETTS
RNA recognition motif protein.
   
 0.789
I7M3F9_TETTS
Zinc knuckle protein.
   
 
 0.788
I7LZW0_TETTS
Splicing factor 3B subunit 1.
   
 
 0.772
Q24H84_TETTS
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.755
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.