STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q23K01_TETTSMyb-like DNA-binding domain protein. (640 aa)    
Predicted Functional Partners:
I7MGV8_TETTS
Transcription factor TFIIB repeat protein.
    
 0.931
Q22M85_TETTS
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.865
I7MHP6_TETTS
DNA-directed RNA polymerase III subunit rpc6.
    
 0.864
I7MJS2_TETTS
Tetratricopeptide repeat protein.
   
 0.829
Q240J8_TETTS
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.813
Q22V65_TETTS
TATA box-binding protein (TBP): present in archaea and protein.
    
 0.802
Q237D3_TETTS
TATA box-binding protein (TBP): present in archaea and protein.
    
 0.802
I7LWR0_TETTS
RNA polymerase Rpb7, amine-terminal domain protein.
    
 0.797
Q235X0_TETTS
DNA-directed RNA polymerase I and III subunit RPAC1.
    
 0.783
I7M6R9_TETTS
DNA-directed RNA polymerase subunit K.
    
 0.759
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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