STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W7XEI3_TETTSRibosome production factor 1. (350 aa)    
Predicted Functional Partners:
Q23DE5_TETTS
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.999
Q245K5_TETTS
RNA recognition motif protein.
   
 
 0.999
Q24GQ1_TETTS
WD domain, G-beta repeat protein.
   
 
 0.999
Q231F4_TETTS
Brix domain protein.
   
 
 0.998
Q236Y1_TETTS
Nucleolar protein,Nop52 protein.
   
 
 0.998
W7WZD1_TETTS
rRNA processing protein (EBP2), putative.
   
 
 0.998
Q23RV6_TETTS
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.997
I7LVT5_TETTS
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.996
I7LXI9_TETTS
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
I7M3R0_TETTS
Elongation factor Tu GTP-binding domain protein.
   
 
 0.996
Your Current Organism:
Tetrahymena thermophila
NCBI taxonomy Id: 312017
Other names: T. thermophila SB210, Tetrahymena thermophila SB210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.